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Table 2 List of RNAseq performed in CT26 samples. RNAseq features of CT26 Mlh1+/+ and Mlh1-/- cell lines before and after in vivo growth. The total number of sequenced reads and the number of mapped reads on the reference transcriptome are reported in the table

From: Non-canonical antigens are the largest fraction of peptides presented by MHC class I in mismatch repair deficient murine colorectal cancer

Sample

Mates

Mapped

CT26 Mlh1+/+

62164033

98.73%

CT26 Mlh1+/+ post BALB/c M3

61712172

98.20%

CT26 Mlh1+/+post NOD-SCID M2

59494801

98.72%

CT26 Mlh1-/-

53045412

98.75%

CT26 Mlh1-/- post BALB/c M2

57481236

98.92%

CT26 Mlh1-/- post BALB/c M6

59195273

98.82%

CT26 Mlh1-/- post BALB/c M7

58457417

98.80%

CT26 Mlh1-/- post NOD-SCID M5

60813574

98.88%