From: Genetic and epigenetic insights into fetal alcohol spectrum disorders
Alcohol exposure* | Tissue | Key upregulated genes/pathways | Key downregulated genes/pathways | Functional pathway | References |
---|---|---|---|---|---|
GD7-9 (daily intraperitoneal dose 2.9 g/kg) | Fetal brain | Â | Timp4, Bmp15, Rnf25, Tulp4 and Dexras1 | Cell proliferation, cell differentiation and apoptosis; affecting tissue growth and remodeling and neural growth and survival | [37] |
GD8 (2 doses, 4 h apart, 2.9 g/kg) | Head fold, 3 h after alcohol exposure | B6N†: glycolysis and pentose phosphate pathway; B6J†and B6N†: tight junction, focal adhesion, adherens junction and regulation of the actin cytoskeleton | B6N†: ribosomal proteins and proteasome; B6J†: none detected | Common signaling pathways linking receptor activation to cytoskeletal reorganization | [40] |
GD8.25 for 46 h (peak alcohol concentration 88 mM) | Whole embryo culture | All 3' miRNA motifs showed upregulatory effects‡ | Most 5' cis-acting regulatory motifs (transcription binding sites) showed down regulatory effects | Developmental deficit of growth, neuronal axis and neural patterning, hemopoiesis and apoptosis | [41] |
GD8.25 for 46 h (peak alcohol concentration 88 mM) | Whole embryo culture | Decreased methylation: Nlgn3, Elavl2, Sox 21, Sim1, Igf2r and Histh3d | Increased methylation: Cyp4f13 | Metabolism (Cyp4f13); imprinting (Igf2r); chromatin (Histh3d); and development (other genes) | [38] |
GD0.5-8.5 | Liver from 28-day-old males | D14ertd449e, Ly6e and Rrm2 | Lima1, Socs2, Cables1 and Vidir | Growth; nervous system development | [39] |