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Table 1 Global gene expression studies after in utero alcohol exposure in mouse models

From: Genetic and epigenetic insights into fetal alcohol spectrum disorders

Alcohol exposure*

Tissue

Key upregulated genes/pathways

Key downregulated genes/pathways

Functional pathway

References

GD7-9

(daily intraperitoneal dose 2.9 g/kg)

Fetal brain

 

Timp4, Bmp15, Rnf25, Tulp4 and Dexras1

Cell proliferation, cell differentiation and apoptosis; affecting tissue growth and remodeling and neural growth and survival

[37]

GD8

(2 doses, 4 h apart, 2.9 g/kg)

Head fold, 3 h after alcohol exposure

B6N†: glycolysis and pentose phosphate pathway; B6J† and B6N†: tight junction, focal adhesion, adherens junction and regulation of the actin cytoskeleton

B6N†: ribosomal proteins and proteasome; B6J†: none detected

Common signaling pathways linking receptor activation to cytoskeletal reorganization

[40]

GD8.25

for 46 h (peak alcohol concentration 88 mM)

Whole embryo culture

All 3' miRNA motifs showed upregulatory effects‡

Most 5' cis-acting regulatory motifs (transcription binding sites) showed down regulatory effects

Developmental deficit of growth, neuronal axis and neural patterning, hemopoiesis and apoptosis

[41]

GD8.25

for 46 h (peak alcohol concentration 88 mM)

Whole embryo culture

Decreased methylation: Nlgn3, Elavl2, Sox 21, Sim1, Igf2r and Histh3d

Increased methylation: Cyp4f13

Metabolism (Cyp4f13); imprinting (Igf2r); chromatin (Histh3d); and development (other genes)

[38]

GD0.5-8.5

Liver from 28-day-old males

D14ertd449e, Ly6e and Rrm2

Lima1, Socs2, Cables1 and Vidir

Growth; nervous system development

[39]

  1. *GD, gestational day. †C57BL/6 substrains: B6J embryos had a higher incidence of FASD features than B6N. ‡A possible interpretation is that many highly expressed genes were not appropriately downregulated because of delayed expression of miRNAs that would normally reduce expression.