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Table 1 Basic sequencing statistics

From: Cancer of the ampulla of Vater: analysis of the whole genome sequence exposes a potential therapeutic vulnerability

Genome

Number of uniquely mapping 50 bp reads

Number of uniquely mapping bases

Genome coverage

Number of germline variants

Uniquely mapping tag pairs

Read-pair coverage

Germline

2,383,981,557

108,322,420,859

40

2,771,201

887,285,914

443

Tumor

2,215,368,333

100,400,536,852

37

-

863,886,211

432

  1. Read pair coverage = (Number of uniquely mappable tag-pairs) × (Insertlength)/Haploid genome size.
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Genome Medicine

ISSN: 1756-994X

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