From: A map of human microRNA variation uncovers unexpectedly high levels of variability
Location | SNV | Pre-mir/mature | [dbSNP]/[1000g aaf] | Region | Number of samples | Population frequency (%) | Number of heterozygous | Number of homozygous |
---|---|---|---|---|---|---|---|---|
1:17185500 | C/T | hsa-mir-3675/hsa-miR-3675-5p | RS137982850/- | 5' seed miR | 1 | 0.0868 | 0 | 1 |
1:100746814 | A/G | hsa-mir-553/hsa-miR-553 | -/0.00 | 5' seed miR | 3 | 0.2604 | 3 | 0 |
1:176998565 | T/C | hsa-miR-488-5p | -/0.00 | 5' seed miR | 1 | 0.0868 | 1 | 0 |
3:164059159 | G/A | hsa-mir-720/hsa-miR-720 | -/0.00 | 5' seed miR | 1 | 0.0868 | 1 | 0 |
4:113569088 | A/G | hsa-miR-367-5p | RS150161032/0.00 | 5' seed miR | 1 | 0.0868 | 1 | 0 |
5:140027435 | C/T | hsa-mir-3655/hsa-miR-3655 | RS146400503/0.01 | 5' seed miR | 13 | 1.1285 | 13 | 0 |
7:73605546 | C/T | hsa-mir-590/hsa-miR-590-5p | -/0.00 | 5' seed miR | 4 | 0.3472 | 4 | 0 |
7:127721934 | C/T | hsa-miR-593-5p | RS73721294/0.02 | 5' seed miR | 42 | 3.6458 | 40 | 2 |
10:29891260 | C/T | hsa-mir-938/hsa-miR-938 | RS12416605/0.15 | 5' seed miR | 301 | 26.1285 | 261 | 40 |
10:53059349 | A/G | hsa-mir-605/hsa-miR-605 | RS113212828/0.00 | 5' seed miR | 8 | 0.6944 | 8 | 0 |
10:105807928 | T/C | hsa-mir-936/hsa-miR-936 | RS79924817/0.01 | 5' seed miR | 11 | 0.9549 | 11 | 0 |
13:53384209 | C/G | hsa-mir-759/hsa-miR-759 | RS144233096/0.00 | 5' seed miR | 4 | 0.3472 | 4 | 0 |
14:101520657 | T/C | hsa-miR-382-5p | -/0.00 | 5' seed miR | 1 | 0.0868 | 1 | 0 |
15:42491848 | A/C | hsa-mir-627/hsa-miR-627 | RS2620381/0.08 | 5' seed miR | 157 | 13.6285 | 145 | 12 |
19:46178206 | T/G | hsa-miR-642a-5p | RS78902025/0.00 | 5' seed miR | 1 | 0.0868 | 1 | 0 |
1:3477292 | C/T | hsa-mir-551a/hsa-miR-551a | -/0.00 | 3' seed miR | 10 | 0.8681 | 10 | 0 |
1:168344829 | C/T | hsa-mir-557/hsa-miR-557 | RS78825966/0.06 | 3' seed miR | 114 | 9.8958 | 98 | 16 |
2:176032384 | T/C | hsa-mir-933/hsa-miR-933 | RS139770589/0.00 | 3' seed miR | 8 | 0.6944 | 8 | 0 |
3:10436198 | G/Aa | hsa-mir-885/hsa-miR-885-3p | New varianta | 3' seed miR | 1 | 0.0868 | 1 | 0 |
3:49311593 | G/C | hsa-mir-4271/hsa-miR-4271 | -/0.00 | 3' seed miR | 2 | 0.1736 | 2 | 0 |
3:160122434 | G/A | hsa-miR-15b-3p | -/0.00 | 3' seed miR | 1 | 0.0868 | 1 | 0 |
4:1988144 | C/A | hsa-mir-943/hsa-miR-943 | -/0.00 | 3' seed miR | 2 | 0.1736 | 2 | 0 |
4:83674520 | G/A | hsa-mir-575/hsa-miR-575 | RS149186367/0.00 | 3' seed miR | 10 | 0.8681 | 10 | 0 |
4:117220909 | G/A | hsa-mir-1973/hsa-miR-1973 | -/0.00 | 3' seed miR | 1 | 0.0868 | 1 | 0 |
5:54468124 | A/T | hsa-miR-449c-3p | RS35770269/0.25 | 3' seed miR | 460 | 39.9306 | 368 | 92 |
5:148810267 | C/T | hsa-miR-145-3p | -/0.00 | 3' seed miR | 1 | 0.0868 | 1 | 0 |
5:159912418 | C/G | hsa-miR-146a-3p | RS2910164/0.62 | 3' seed miR | 933 | 80.9896 | 458 | 475 |
5:168690635 | C/T | hsa-mir-585/hsa-miR-585 | RS62376935/0.10 | 3' seed miR | 199 | 17.2743 | 176 | 23 |
7:150935577 | G/A | hsa-mir-671/hsa-miR-671-3p | -/0.00 | 3' seed miR | 1 | 0.0868 | 1 | 0 |
8:10682898 | A/G | hsa-mir-1322/hsa-miR-1322 | -/0.00 | 3' seed miR | 5 | 0.434 | 5 | 0 |
10:29833959 | C/T | hsa-mir-604/hsa-miR-604 | -/0.00 | 3' seed miR | 3 | 0.2604 | 3 | 0 |
12:113132901 | G/A | hsa-mir-1302-1/hsa-miR-1302 | RS74647838/0.03 | 3' seed miR | 53 | 4.6007 | 50 | 3 |
14:101351088 | A/C | hsa-miR-136-3p | RS147448304/0.00 | 3' seed miR | 1 | 0.0868 | 1 | 0 |
16:820249 | G/A | hsa-mir-662/hsa-miR-662 | RS9745376/0.05 | 3' seed miR | 97 | 8.4201 | 87 | 10 |
16:2321809 | G/A | hsa-mir-940/hsa-miR-940 | RS149527765/0.00 | 3' seed miR | 1 | 0.0868 | 1 | 0 |
18:56118358 | C/T | hsa-miR-122-3p | RS41292412/0.00 | 3' seed miR | 10 | 0.8681 | 10 | 0 |
19:2234080 | G/A | hsa-mir-1227/hsa-miR-1227 | RS139405773/0.00 | 3' seed miR | 2 | 0.1736 | 2 | 0 |
19:10662866 | G/A | hsa-mir-1238/hsa-miR-1238 | -/0.00 | 3' seed miR | 1 | 0.0868 | 1 | 0 |
19:10928119 | A/G | hsa-mir-199a-1/hsa-miR-199a-3p | -/0.01 | 3' seed miR | 13 | 1.1285 | 13 | 0 |
19:54200843 | C/T | hsa-mir-525/hsa-miR-525-3p | -/0.00 | 3' seed miR | 1 | 0.0868 | 1 | 0 |
19:54201692 | A/C | hsa-miR-523-3p | -/0.00 | 3' seed miR | 3 | 0.2604 | 3 | 0 |
19:54238189 | G/A | hsa-mir-518d/hsa-miR-518d-3p | RS73602910/0.00 | 3' seed miR | 6 | 0.5208 | 6 | 0 |
20:33578251 | A/G | hsa-miR-499a-3p | RS3746444/0.18 | 3' seed miR | 358 | 31.0764 | 311 | 47 |
20:33578255 | C/T | hsa-miR-499a-3p | RS150018420/0.00 | 3' seed miR | 3 | 0.2604 | 3 | 0 |
22:42296995 | A/G | hsa-miR-33a-3p | RS77809319/0.00 | 3' seed miR | 2 | 0.1736 | 2 | 0 |