|  | TCGA data set | Gravendeel data set (glioblastoma cases) | |||
---|---|---|---|---|---|---|
Gene | Category | Coefficienta | P | Probesetb | Coefficienta | P |
ADD2 | Upregulated | -0.13 | 0.2858 | 237336_at | -0.17 | 0.1420 |
CD9 | Upregulated | 0.18 | 0.0731 | 201005_at | 0.17 | 0.0689 |
CEBPB | Upregulated | 0.19 | 0.1028 | 212501_at | 0.17 | 0.0651 |
DDIT3 | Upregulated | 0.17 | 0.0128 | 209383_at | 0.09 | 0.2777 |
FOXG1 | Upregulated | 0.13 | 0.0861 | 206018_at | 0.11 | 0.0380 |
HMGA2 | Downregulated | 0.13 | 0.1456 | 1561633_at | -0.84 | 0.2459 |
HOXD10 | Upregulated | 0.12 | 0.0108 | 229400_at | 0.15 | 0.0021 |
IRX2 | Downregulated | -0.19 | 0.2346 | 228462_at | -0.20 | 4.4 × 10-4 |
LMO4 | Upregulated | 0.24 | 0.1046 | 209205_s_at | 0.20 | 0.1435 |
LYST | Upregulated | 0.05 | 0.5590 | 203518_at | 0.10 | 0.4151 |
MAF | Downregulated | 0.10 | 0.5873 | 209348_s_at | 0.38 | 0.0074 |
MAP6 | Downregulated | 0.16 | 0.3063 | 235672_at | -0.30 | 0.0087 |
MT2A | Upregulated | 0.16 | 0.1554 | 212185_x_at | 0.27 | 0.0127 |
MYL9 | Downregulated | 0.08 | 0.3764 | 201058_s_at | 0.15 | 0.0252 |
NDN | Downregulated | -0.04 | 0.4874 | 209550_at | -0.22 | 6.0 × 10-5 |
NELL2 | Downregulated | 0.08 | 0.1021 | 203413_at | 0.14 | 0.0215 |
PDE1C | Upregulated | 0.20 | 0.0105 | 236344_at | 0.21 | 0.0134 |
PLA2G4A | Upregulated | -0.06 | 0.3198 | 210145_at | 0.30 | 2.9 × 10-4 |
PLCH1 | Downregulated | 0.10 | 0.3165 | 214745_at | 0.45 | 0.0094 |
PLS3 | Upregulated | 0.13 | 0.0381 | 201215_at | 0.30 | 0.0069 |
PRSS12 | Upregulated | -0.11 | 0.1865 | 213802_at | 0.20 | 0.0296 |
PTEN | Downregulated | -0.53 | 0.0047 | 228006_at | -0.40 | 0.0062 |
SDC2 | Downregulated | 0.22 | 0.0044 | 212158_at | 0.28 | 5.8 × 10-4 |
ST6GALNAC5 | Downregulated | 0.01 | 0.9116 | 220979_s_at | 0.08 | 0.2416 |
SULF2 | Upregulated | -0.11 | 0.1525 | 233555_s_at | -0.15 | 0.0930 |
SYNM | Downregulated | -0.06 | 0.5620 | 212730_at | 0.08 | 0.2613 |
TAGLN | Downregulated | 0.03 | 0.5947 | 205547_s_at | 0.17 | 0.0030 |
TES | Downregulated | -0.05 | 0.5759 | 202720_at | 0.07 | 0.5499 |
TUSC3 | Downregulated | -0.14 | 0.0079 | 209227_at | -0.18 | 0.0060 |