Table 1 Isoform expression in breast-cancer cell lines as measured by reverse transcriptase -quantitative PCR (RT-qPCR).
| Â | Â | Â | RT-qPCR | ||
|---|---|---|---|---|---|
Gene | Transcript ID | Exon array | MCF7 | MDA-MB-231 | T47D |
TPM4 | ENST00000344824 | -7.75 | -500 | -5.55 | -111.11 |
| Â | ENST00000300933 | 5.47 | 2.14 | 1.01 | -2.08 |
WDR45 | ENST00000460501 | 2.86 | 5.22 | 2.17 | 1.24 |
| Â | ENST00000486337 | -2.48 | -2.22 | -1.61 | 1.12 |
GART | ENST00000381831 | 2.38 | 1.66 | -1.42 | 2.78 |
| Â | ENST00000381815 | -3.83 | -2.17 | -1.13 | 1.09 |
FLII | ENST00000474265 | -3.48 | -2.32 | -1.58 | 1.58 |
| Â | ENST00000461110 | 2.27 | 1.27 | 1.85 | 3.14 |
CHN1 | ENST00000490654 | 2.47 | 109 | 193 | 12 |
| Â | ENST00000444573 | -4.27 | -16.66 | 10.23 | -55.55 |
OXR1 | ENST00000312046 | 3.72 | 19.7 | 33.5 | 13.6 |
| Â | ENST00000445937 | -3.6 | -100 | 3.37 | -26.31 |
SRGAP3 | ENST00000489616 | 2.11 | 3.61 | 2.88 | 12.93 |
| Â | ENST00000475560 | -4.39 | -12.5 | -500 | 1.04 |