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Table 2 Summary of primers for fungal rDNA amplification used in mycobiome studies

From: The human mycobiome in health and disease

Amplicon

Primer sets

Primer sequence

Length*

Citation

ITS

ITS1

ITS1F/

ITS2

CTTGGTCATTTAGAGGAAGTAA

260 bp

[8, 31]

   

GCTGCGTTCTTCATCGATGC

  
 

ITS2

3271-ITS2F/

3271-ITS2R

CARCAAYGGATCTCTTGG

340-360 bp

[19]

   

GATATGCTTAAGTTCAGCGGGT

  
 

ITS1-5.8S-ITS2

ITS1F/

ITS4

CTTGGTCATTTAGAGGAAGTAA

550 bp

[65]

   

TCCTCCGCTTATTGATATGC

  

LSU

LROR_F/

LR5-F

CCGCTGAACTTAAGCATATCAATA

860 bp

[65]

  

CGATCGATTTGCACGTCAGA

  
 

NL1/

NL4

GCATATCAATAAGCGGAGGAAAAG

600 bp

[66]

  

GGTCCGTGTTTCAAGACGG

  

SSU

18S_0067a_deg/NSR 399

AAGCCATGCATGYCTAAGTATMA

350 bp

[21]

  

TCTCAGGCTCCYTCTCCGG

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