From: VariantDB: a flexible annotation and filtering portal for next generation sequencing data
Sample | Filters | Number of resulting variants | Number of annotations | First runa | Second runb |
---|---|---|---|---|---|
Exome (77 K variants) | De novo, exonic , five quality thresholds | 859 | 31 | 8 s | 6 s |
Exome (78 K variants) | Five quality thresholds, SnpEff high/moderate impact | 1,007 | 110 | 14 s | 8 s |
Exome (78 K variants) | Nonec | 78,423 | 110 | 12 s | 11 s |