Figure 1
From: Reducing INDEL calling errors in whole genome and exome sequencing data
Performance comparison between the Scalpel and GATK-UnifiedGenotyper in terms of sensitivity (A) and false discovery rate (B) at different coverage based on simulation data. Each dot represents one down-sampled experiment. Round dots represent performance of general INDELs (that is, INDELs of size starting at 1 bp) and triangles represent performance of large INDELs (that is, INDELs of size greater than 5 bp). The data of Scalpel are shown in blue while GATK-UnifiedGenotyper are shown in green.