Figure 4
From: SRST2: Rapid genomic surveillance for public health and hospital microbiology labs
Accuracy of SRST2 allele calling at low read depths and with expanded MLST database size. MLST analysis of public S. aureus data. (N = 10 read sets; each sampled 100 times to different depths; details in Methods). Tests were grouped by read depth and accuracy rates (y-axis, correct allele calls as a proportion of all tests), calculated at each depth (x-axis, red slashes indicate scale change from 1 to 10). Red, real S. aureus MLST database; blue, expanded S. aureus MLST database (see Methods); grey, unsampled data from five species mapped to real databases (as shown in Figures 1 and 3).