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Table 1 Functional enrichment of network modules

From: Higher gene expression variability in the more aggressive subtype of chronic lymphocytic leukemia

 

Genes

Top enriched terms

Highly connected genes

Module 1

135

Cell death, cell differentiation and development

BCL2L1, PRKCA

Module 2

261

Ribosome, translation

LMO2, NR3C1, POU2F1, RARA, RBPJ, RPL14, YY1

Module 3

160

Signal transduction, cell communication, membrane, protein kinase activity, phosphorylation

ARHGEF6, BCL3, CAV1, CRK, FGFR1

Module 4

151

Transcription factor activity, DNA binding, gene expression

CCL2, JUND, STAT1

Module 5

179

Cell cycle

ATF2, CCNB2, CDC20, CDC25A, CREB1, E2F4, ESR1, FOXM1, MIKI67, MYC, POU2F2, RBL2, SP3, TYMS, UBE2C, VRK1

  1. The first column shows the number of genes contained in every module of the network. The second column shows the top terms for which the corresponding module is enriched. The last column lists highly connected genes (degree ≥35) of the corresponding module ordered alphabetically.