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Table 1 Worldwide distribution of OCT1 alleles

From: Global genetic analyses reveal strong inter-ethnic variability in the loss of activity of the organic cation transporter OCT1

World region

Population

N

chr.

Major OCT1 alleles

*1

*2

*3

*4

*5

*6

*7

*8

*9

*10

*11

*12

*13

*14

*15

*16

Sub-Saharan Africa

San

6

12

91.7

0

0

0

0

0

0

8.3

0

0

0

0

0

0

0

0

Mbuti Pygmy

13

26

76.9

7.7

0

0

0

0

0

15.4

0

0

0

0

0

0

0

0

Biaka Pygmy

26

52

76.9

11.5

0

0

0

0

9.6

1.9

0

0

0

0

0

0

0

0

Bantu S.W.

8

16

87.5

6.3

0

0

0

0

6.3

0

0

0

0

0

0

0

0

0

Bantu N.E.

11

22

63.6

9.1

0

0

0

0

9.1

18.2

0

0

0

0

0

0

0

0

Bantu (LWK-1 K)

97

194

88.1

4.1

0

0

0

0

2.6

5.1

0

0

0

0

0

0

0

0

Mandenka

22

44

90.9

4.6

0

0

0

0

2.3

2.3

0

0

0

0

0

0

0

0

Yoruba

22

44

95.5

0

0

0

0

0

2.3

2.3

0

0

0

0

0

0

0

0

Yoruba (YRI-1 K)

88

176

90.3

2.3

0

0

0

0

1.7

5.7

0

0

0

0

0

0

0

0

Sub-Saharan Africa mean

293

586

84.6

5.1

0

0

0

0

3.8

6.6

 

0

0

0

0

0

0

0

(range)

  

(63.6-95.5)

(0.0-11.5)

    

(0.0-9.6)

(0.0-18.2)

        

North Africa and Middle East

Mozabite

29

58

82.8

12.1

0

1.72

0

1.72

1.72

0

0

0

0

0

0

0

0

0

Bedouin

46

92

72.8

9.8

10.9

0

3.26

0

2.17

1.1

0

0

0

0

0

0

0

0

Palestinian

45

90

78.9

13.3

3.33

0

0

2.22

2.22

0

0

0

0

0

0

0

0

0

Druze

42

84

77.4

17.9

4.76

0

0

0

0

0

0

0

0

0

0

0

0

0

North Africa and Middle East mean

162

324

78.2

13.3

4.7

0.4

0.8

1.0

1.5

0.3

0

0

0

0

0

0

0

0

(range)

  

(73.9-82.8)

(9.8-17.9)

(0.0-10.9)

(0.0-1.7)

(0.0-3.3)

(0.0-2.2)

(0.0-2.2)

(0.0-1.12)

        

Europe

Tuscan

8

16

87.5

12.5

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Tuscan (TSI-1 K)

98

196

71.9

18.9

5.6

2.55

0.51

0

0

0.5

0

0.5

0

0

0

0

0

0

Sardinian

28

56

69.6

21.4

1.8

5.36

0

1.79

0

0

0

0

0

0

0

0

0

0

North Italian

14

28

89.3

7.14

3.6

0

0

0

0

0

0

0

0

0

0

0

0

0

Iberian (IBS-1 K)

14

28

75.0

14.3

3.6

7.14

0

0

0

0

0

0

0

0

0

0

0

0

French Basque

24

48

72.9

18.8

4.2

4.17

0

0

0

0

0

0

0

0

0

0

0

0

French

28

56

62.5

21.4

7.14

1.79

5.36

1.79

0

0

0

0

0

0

0

0

0

0

British (GBR-1 K)

89

178

72.5

16.3

5.06

2.25

3.37

0.56

0

0

0

0

0

0

0

0

0

0

Orcadian

15

30

80.0

13.3

6.67

0

0

0

0

0

0

0

0

0

0

0

0

0

German

117

234

71.4

15.8

8.12

2.14

2.56

0

0

0

0

0

0

0

0

0

0

0

Finn (FIN-1 K)

93

186

78.5

13.4

5.38

1.61

1.08

0

0

0

0

0

0

0

0

0

0

0

Adygei

17

34

70.6

17.6

5.88

0

2.94

0

0

0

0

2.94

0

0

0

0

0

0

 

Russian

25

50

66.0

10.0

10.0

6.00

8.00

0

0

0

0

0

0

0

0

0

0

0

Europe mean

570

1,140

74.4

15.5

5.1

2.5

1.8

0.3

0

0.04

 

0.3

0

0

0

0

0

0

(range)

  

(62.5-89.3)

(7.1-21.4)

(0.0-10.0)

(0.0-7.1)

(0.0-8.0)

(0.0-1.8)

 

(0.0-0.5)

 

(0.0-2.94)

      

Central Asia

Balochi

24

48

66.7

27.1

6.25

0

0

0

0

4.2

0

0

0

0

0

0

0

0

Brahui

25

50

62.0

26.0

6.00

0

6

0

0

0

0

0

0

0

2

0

0

0

Makrani

25

50

84.0

16.0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Sindhi

24

48

83.3

12.5

0

0

0

0

4.17

0

0

0

0

0

0

0

0

0

Pathan

25

50

72

26

2

0

0

0

0

0

0

0

0

0

0

0

0

0

Kalash

23

46

73.9

19.6

6.52

0

0

0

0

0

0

0

0

0

2.17

0

0

0

Burusho

25

50

84

6

6

0

4.00

0

0

0

0

0

0

0

0

0

0

0

Hazara

23

46

89.1

4.35

2.17

0

0

2.17

0

0

0

0

0

0

0

2.17

0

0

Uygur

10

20

80

15

5

0

0

0

0

0

0

0

0

0

0

0

0

0

 

Yakut

25

50

92.0

0

4.00

0

0

0

0

0

4.00

0

0

0

0

0

0

0

Central Asia mean

229

458

78.7

14.8

3.8

0

1.0

0.2

0.4

0.42

0.4

0

0

0

0.4

0.2

0

0

(range)

  

(62.0-92.0)

(0.0-27.1)

(0.0-6.5)

 

(0.0-6.0)

(0.0-2.2)

(0.0-4.2)

(0.0-4.2)

(0.0-4.0)

   

(0.0-2.2)

(0.0-2.2)

  

East Asia and Oceania

Dai

10

20

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

She

10

20

90.0

0

0

0

0

0

0

0

0

0

0

10.0

0

0

0

0

Tujia

10

20

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Yizu

10

20

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Naxi

9

18

94.4

0

0

0

0

0

0

0

0

0

5.56

0

0

0

0

0

Tu

10

20

90.0

0

0

0

0

0

0

0

0

0

0

0

0

0

5.0

0

Xibo

9

18

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Mongola

10

20

85.0

10.0

0

0

0

0

0

0

5.00

0

0

0

0

0

0

0

Hezhen

9

18

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Daur

10

20

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Oroqen

9

18

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Han

45

90

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Han Beijing (CHB-1 K)

97

194

98.5

0.52

0

0

0

0

0

0

0.52

0

0.52

0

0

0

0

0

Han South(CHS-1 K)

100

200

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Lahu

8

16

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Miaozu

10

20

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Cambodian

10

20

95.0

5.0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Japanese

30

60

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Japanese (JPT-1 K)

89

178

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Melanesian

14

28

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

 

Papuan

17

34

100

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

East Asia and Oceania mean

526

1,052

97.8

0.7

0

0

0

0

0

0

0.3

0

0.3

0.5

0

0

0.2

0.2

(range)

   

(85.0-100.0)

(0.0-10.0)

      

(0.0-5.0)

 

(0.0-5.6)

(0.0-10.0)

  

(0.0-5.0)

(0.0-5.0)

America

Colombian

7

14

57.1

42.9

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Karitiana

14

28

39.3

60.7

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Maya

21

42

66.7

33.3

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Pima

14

28

82.1

17.9

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Surui

8

16

6.25

93.8

0

0

0

0

0

0

0

0

0

0

0

0

0

0

America mean

 

64

128

50.3

49.7

0

0

0

0

0

0

0

0

0

0

0

0

0

0

(range)

   

(6.3-82.1)

(17.9-93.7)

              

Admixed populations

Colombian (CLM-1 K)

60

120

65.8

29.2

3.33

0.83

0.83

0

0

0

0

0

0

0

0

0

0

0

Mexican (MXL-1 K)

66

132

59.1

32.6

4.55

0

3.03

0

0.76

0

0

0

0

0

0

0

0

0

Puerto Rican (PUR-1 K)

55

110

76.4

20.0

0.91

0

1.82

0

0

0

0

0.91

0

0

0

0

0

0

Caucasians (CEU-1 K)

85

170

72.4

15.3

8.82

1.76

1.18

0.59

0

0

0

0

0

0

0

0

0

0

Africans (ASW-1 K)

61

122

87.7

8.20

1.64

0.82

0

0

0.82

0

0

0

0

0

0

0

0

0.82

Worldwide mean

 

2,171

4,342

81.0

12.2

2.14

0.57

0.65

0.16

0.68

0.99

0.14

0.07

0.09

0.15

0.07

0.03

0.07

0.01

(range)

   

(6.3-100.0)

(0.0-93.8)

(0.0-10.9)

(0.0-7.1)

(0.0-8.0)

(0.0-2.2)

(0.0-9.6)

(0.0-18.2)

(0.0-5.0)

(0.0-2.9)

(0.0-5.6)

(0.0-10.0)

(0.0- 2.2)

(0.2-2.2)

(0.0-5.0)

(0.0-0.6)

  1. N number of individuals analyzed, chr. number of chromosomes analyzed