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Table 2 Numbers of genes in data sets and used in existing classifiers

From: Transferring genomics to the clinic: distinguishing Burkitt and diffuse large B cell lymphomas

 

GSE4732_p1

GSE4475

Overlap

HGNC approved genes on platform

2411

12495

1913

Genes used in authors’ classifier

217

58

21

Classifier genes located in dataa

214

58

21

Classifier genes available in other data setb

172

28

-

  1. aWe were unable to locate all reported classifier genes in GSE4732_p1
  2. bDave et al. [30] classifier genes available in GSE4475 and Hummel classifier genes in GSE4732_p1
  3. HGNC: HUGO Gene Nomenclature Committee, gene symbols from previous studies are checked and updated by HGNChelper package