Table 1 Criteria checklist for enhanced transparency and reproducibility in clinical omics
From: Use of semantic workflows to enhance transparency and reproducibility in clinical omics
| ▪ Exact input data used for the analysis |
| ▪ Key intermediate data generated from the analysis |
| ▪ Third party data (i.e., data from external sources) |
| ▪ Output data |
| ▪ Provenance of all data used |
| ▪ All code/software used in the analysis |
| ▪ Provenance of all code used |
| ▪ Documentation of computing environment used |
| ▪ Veracity checks to ensure analytical validity |
| ▪ High-level flow diagram describing the analysis |