Skip to main content

Table 1 Criteria checklist for enhanced transparency and reproducibility in clinical omics

From: Use of semantic workflows to enhance transparency and reproducibility in clinical omics

▪ Exact input data used for the analysis
▪ Key intermediate data generated from the analysis
▪ Third party data (i.e., data from external sources)
▪ Output data
▪ Provenance of all data used
▪ All code/software used in the analysis
▪ Provenance of all code used
▪ Documentation of computing environment used
▪ Veracity checks to ensure analytical validity
▪ High-level flow diagram describing the analysis