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Table 1 Recommended databases for interpreting somatic mutation results in cancer

From: Next-generation sequencing to guide cancer therapy

Database

Institute

Organized by

Reference

TARGET

BROAD

Gene

[46]

PCT

MD Anderson

Gene

[43]

cBioPortal

MSK

TCGA diseases

[41]

COSMIC

Sanger

Gene

[39]

IntOGen

University Pompeu Fabra

Gene

[73]

My Cancer Genome

Vanderbilt

Disease

[45]

CIViC

Washington University

Variant

[74]

DGIdb

Washington University

Drug/gene interaction

[75]

  1. Each database is listed with hosting institution, website, and the primary search term by which it is organized. TCGA The Cancer Genome Atlas