Skip to main content

Table 1 Recommended databases for interpreting somatic mutation results in cancer

From: Next-generation sequencing to guide cancer therapy

Database Institute Organized by Reference
TARGET BROAD Gene [46]
PCT MD Anderson Gene [43]
cBioPortal MSK TCGA diseases [41]
COSMIC Sanger Gene [39]
IntOGen University Pompeu Fabra Gene [73]
My Cancer Genome Vanderbilt Disease [45]
CIViC Washington University Variant [74]
DGIdb Washington University Drug/gene interaction [75]
  1. Each database is listed with hosting institution, website, and the primary search term by which it is organized. TCGA The Cancer Genome Atlas