Fig. 5
Correlation between differential gene expression, methylation, and miRNA abundance. Red points represent positive correlations, blue negative, at p < 10−5. The lowest panel shows the differentially expressed genes for each individual (ordered from left to right as Aa through Ml), nine of whom had a small number of genes negatively correlated with the major set of co-regulated transcripts that were extreme in that individual. The middle panel shows which of 150 miRNA correlated with the transcripts, including several species of miRNA that were either positively or negatively correlated with the extreme transcript sets in two or more individuals. The top panel shows methylation sites within 2 kb of the TSS that correlated with transcripts; these were almost all unique to one individual