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Fig. 2 | Genome Medicine

Fig. 2

From: A genome-wide approach to link genotype to clinical outcome by utilizing next generation sequencing and gene chip data of 6,697 breast cancer patients

Fig. 2

Overview of the analysis setup. Mutation status and gene expression levels obtained from the TCGA repository are compared using ROC analysis to identify a gene expression signature for each mutation. Then, the ability to predict survival for this signature is assessed in the gene chip dataset. The entire analysis can be made for a single gene or for up to three genes together

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