Gene | % of samples w/ mutations | Genes from ROC analysis (n) | Upregulated genes | Downregulated genes | ||
---|---|---|---|---|---|---|
P value | HR | P value | HR | |||
(A) | ||||||
AKT1 | 5.5 | 136 | <1E-16 | 1.8 | 1.60E-15 | 0.64 |
ATG2B | 5.1 | 20 | 6.70E-09 | 1.4 | 6.90E-14 | 0.66 |
COL6A2 | 5.3 | 151 | 3.60E-13 | 1.5 | 1.50E-09 | 0.72 |
MTUS2 | 5.8 | 97 | 6.90E-06 | 1.3 | 1.10E-16 | 0.63 |
OSBPL10 | 5.2 | 46 | 2.40E-08 | 1.4 | 1.80E-12 | 0.68 |
POTEF | 5.7 | 16 | 1.60E-11 | 1.4 | 5.60E-16 | 0.64 |
SCLT1 | 5.5 | 27 | 3.90E-08 | 1.4 | 5.10E-13 | 0.67 |
TNC | 6 | 15 | 1.10E-07 | 1.3 | <1E-16 | 0.63 |
TRANK1 | 5.3 | 10 | <1E-16 | 1.7 | 1.90E-05 | 0.79 |
TRAPPC10 | 6.1 | 3 | <1E-16 | 1.7 | 2.60E-11 | 0.69 |
(B) | ||||||
ARFGEF1 | 6.4 | 63 | <1E-16 | 0.52 | <1E-16 | 1.7 |
BRCA2 | 6 | 74 | <1E-16 | 0.52 | 2.20E-16 | 1.6 |
GGA3 | 5.5 | 359 | <1E-16 | 0.49 | 1.40E-14 | 1.5 |
MPP6 | 5.5 | 48 | <1E-16 | 0.53 | <1E-16 | 1.8 |
PHEX | 6.6 | 20 | <1E-16 | 0.47 | 2.60E-15 | 1.5 |
PXDNL | 6.1 | 255 | <1E-16 | 0.51 | <1E-16 | 1.6 |
RGS22 | 6 | 350 | <1E-16 | 0.5 | <1E-16 | 1.7 |
TP53 | 28.3 | 1566 | <1E-16 | 0.48 | 5.60E-16 | 1.6 |
UBR5 | 9.9 | 8 | <1E-16 | 0.53 | <1E-16 | 1.7 |
UNC5D | 6.6 | 51 | <1E-16 | 0.54 | <1E-16 | 1.8 |