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Fig. 2 | Genome Medicine

Fig. 2

From: Annotation of pseudogenic gene segments by massively parallel sequencing of rearranged lymphocyte receptor loci

Fig. 2

Frequency of productive rearrangement percentages for TCRβ V gene segments. For each individual, we calculated the percentage of productive unique rearrangements for each V gene segment found in the sample. The values were then binned in increments of 10 % (e.g., those with values between 0 and 10 % are included in the ‘10’ bin), with the height of the bars representing the number of times each percentage range was found in the cohort. a Frequency of productive rearrangement percentages for all 51 TCRβ V gene segments used in this study. The majority of V gene segments are found productively rearranged either ~90 % or ~30 % of the time. b Frequency of productive rearrangement percentages for the 37 TCRβ V gene segments used in this study that are annotated as functional in the IMGT database. The majority of these gene segments are found within productive rearrangements of the TCRβ gene ~90 % of the time. c Frequency of productive rearrangement percentages for the nine TCRβ V gene segments used in this study among V gene segments annotated as pseudogenes or open reading frames in the IMGT database. The majority of these gene segments are found within productive rearrangements of the TCRβ gene ~30 % of the time

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