Table 1 External data processed and integrated into the cell line portal
Data type | Source | Number cell lines | Reference |
|---|---|---|---|
Cancer cell line RNA-Seq data (2 × 101 bp) | CCLE | 781 | [4], https://cghub.ucsc.edu/datasets/ccle.html |
Cancer cell line RNA-Seq data (2 × 75 bp) | Klijn et al. | 301 | [5], https://www.ebi.ac.uk/ega/datasets/EGAD00001000725 |
Mutations | CCLE | 781 | [4] |
Mutations | Klijn et al. | 675 | [5], Supplementary data 3 |
HLA Class I and Class II types | Adams et al. | 49 | [16] |