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Table 1 Examples of databases offering immunological data

From: Immunoinformatics and epitope prediction in the age of genomic medicine

Database

Content

Reference

SYFPEITHI

MHC ligands, T-cell epitopes

[14]

IEDB

Epitopes, epitope–MHC/BCR complexes

[15]

IMGT

Antibodies, T-cell receptors

[18]

IMGT/HLA

HLA alleles

[18]

MHCBN 4.0

MHC peptides, TAP-interacting peptides

[16]

AntiJen

MHC ligands, TCR–MHC complexes, T-cell epitopes, TAP, B-cell epitopes, protein–protein interactions

[17]

Dana-Farber Repository

MHC ligands for machine learning

[21]

  1. Abbreviations: BCR B-cell receptor, HLA human leukocyte antigen, IEDB Immune Epitope Database, IMGT International ImMunoGeneTics information system, MHC major histocompatibility complex, MHCBN MHC binding and non-binding, TAP transporter associated with antigen processing, TCR T-cell receptor