Table 1 List of pancreatic ductal adenocarcinoma omics datasets used in multidimensional analysis
| Â | Dataset | Platform | Samples | Reference | |
|---|---|---|---|---|---|
accession ID | Â | Normal | Pancreatic cancer | (PMID) | |
mRNA | GSE15471 | Affymetrix Human Genome U133 Plus 2.0 | 36 | 36 | 19260470 |
GSE28735 | Affymetrix Human Gene 1.0 ST | 45 | 45 | 22363658 | |
GSE41368 | Affymetrix Human Gene 1.0 ST | 6 | 6 | 24120476 | |
GSE43797 | Illumina HumanHT-12Â V4.0 expression bead chip | 5 | 6 | 24072181 | |
miRNA | GSE24279 | Febit human miRBase v11 | 22 | 136 | NA |
GSE29352 | Febit Homo sapiens miRBase 13.0 plus | 20 | 14 | NA | |
GSE41369 | NanoString nCounter Human miRNA assay (v1) | 9 | 9 | 24120476 | |
GSE43796 | Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray | 5 | 6 | 24072181 | |
Epigenome | GSE49149 | Illumina HumanMethylation450 Bead Chip | 29 | 167 | 24500968 |
PAAD (TCGA) | Illumina Infinium Human DNA Methylation 450 | 6 | 6 | NA | |
Survival | GSE21501 | Agilent-014850 Whole Human Genome Microarray | Â | 132 | 20644708 |
| Â | GSE32676 | Affymetrix Human Genome U133 Plus 2.0 Array | 25 | 7 | 22261810 |