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Fig. 3 | Genome Medicine

Fig. 3

From: Extracting a low-dimensional description of multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer

Fig. 3

Illustration of the synthetic data, aligned with four groups of bars in each of (a)–(c). Rows represent genes and columns represent samples. a Negative test log-likelihood per instance averaged over 20 different instantiations of the synthetic data (lower is better). b Rand index for module recovery averaged over 20 different instantiations of the synthetic data. c F-measure for feature dependency recovery averaged over 20 different instantiations of the synthetic data. The Wilcoxon signed rank test p value represented on each bar (except the bars for INSPIRE) measures the statistical significance of the difference between the method and INSPIRE

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Genome Medicine

ISSN: 1756-994X

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