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Table 1 Top 20 differentially expressed genes following heat shock

From: Characterisation of the global transcriptional response to heat shock and the impact of individual genetic variation

Gene

EntrezID

logFC

FC

Average expression

t

p value

Adjusted p value

B

HSPA1B

3304

4.5

22.2

11.9

53.9

1.1E-52

1.4E-48

105.5

DNAJB1

3337

3.7

12.7

10.9

42.2

1.8E-46

1.1E-42

93.4

CLK1

1195

1.8

3.5

10.8

41.1

8.4E-46

3.5E-42

92.0

HSPA6

3310

4.2

18.3

9.4

29.9

7.8E-38

2.4E-34

75.2

HSPH1

10808

1.2

2.3

12.7

23.3

8.2E-32

2.0E-28

61.9

ZFAND2A

90637

1.9

3.8

9.5

23.2

9.8E-32

2.0E-28

61.8

TNFSF14

8740

1.4

2.7

9.4

23.0

1.4E-31

2.5E-28

61.4

HSPA6

3310

2.8

6.8

7.8

21.9

2.3E-30

3.6E-27

58.7

FXR1

8087

0.9

1.9

9.9

20.8

3.3E-29

4.5E-26

56.1

SERPINH1

871

1.9

3.7

8.7

20.4

8.6E-29

1.1E-25

55.2

TDG

6996

−0.9

0.5

10.7

−20.4

1.1E-28

1.2E-25

55.0

CCL3

6348

−1.3

0.4

11.4

−19.8

5.1E-28

5.2E-25

53.4

KIAA0907

22889

0.9

1.9

9.5

19.5

1.0E-27

9.9E-25

52.7

HSPA4L

22824

0.9

1.9

9.3

19.2

2.2E-27

2.0E-24

52.0

JUN

3725

1.2

2.3

9.2

19.0

3.5E-27

2.9E-24

51.5

CACYBP

27101

0.9

1.9

11.4

18.9

5.7E-27

4.2E-24

51.1

DNAJB4

11080

1.3

2.4

7.2

18.9

5.8E-27

4.2E-24

51.0

IER5

51278

1.4

2.6

10.5

18.1

4.3E-26

2.8E-23

49.1

LMAN2L

81562

0.8

1.7

8.4

18.1

4.9E-26

3.1E-23

48.9

BANP

54971

0.8

1.8

10.8

18.0

5.9E-26

3.47E-23

48.8

  1. The most significant differentially expressed genes for a panel of LCLs exposed to heat shock (42 °C for 1 h, 6 h recovery) and assayed by microarray are shown following limma analysis