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Fig. 4 | Genome Medicine

Fig. 4

From: Copy number analysis by low coverage whole genome sequencing using ultra low-input DNA from formalin-fixed paraffin embedded tumor tissue

Fig. 4

CN profiles for two breast tumor samples (LP S1 (a, b) and LP S4 (c, d)). a, c Low coverage WGS from 5 ng input of DNA. b, d MIP arrays in the range of 80–100 ng input of DNA. Each data point in (a) and (c) represents normalized read count ratios from a 50 kb window. Segments were removed from highly repetitive or problematic regions [8]

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Genome Medicine

ISSN: 1756-994X

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