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Fig. 5 | Genome Medicine

Fig. 5

From: Copy number analysis by low coverage whole genome sequencing using ultra low-input DNA from formalin-fixed paraffin embedded tumor tissue

Fig. 5

CN profiles for two breast pre-cancerous samples (P1 (a, b) and P2 (c, d)). a, c MIP arrays in the range of 40–80 ng input of DNA. b, d LC WGS from 5 ng input of DNA. Each data point in (b) and (d) represents normalized read count ratios from a 50 kb window. Segments were removed from highly repetitive or problematic regions [8]

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