Enrichment analysis
|
xEnricher
|
A template for enrichment analysis
|
~40
|
xEnricherGenes
|
Gene-based enrichment analysis using a wide variety of ontologiesb
|
~40
|
xEnricherSNPs
|
SNP-based enrichment analysis using Experimental Factor Ontology on GWAS traits
|
~70
|
xEnricherYours
|
Custom-based enrichment analysis using user-defined ontologies
|
~5
|
xEnrichConciser
|
Removing redundant ones from enrichment outputs
|
~15
|
xEnrichBarplot
|
Barplot of enrichment outputs
|
<1
|
xEnrichCompare
|
Side-by-side barplots of comparative enrichment outputs
|
<1
|
xEnrichDAGplot
|
DAG plot of enrichment outputs
|
<1
|
xEnrichDAGplotAdv
|
DAG plot of comparative enrichment outputs
|
<1
|
Annotation analysis
|
xGRviaGeneAnno
|
Annotation analysis using nearby gene annotations by a wide variety of ontologiesb
|
~60
|
xGRviaGenomicAnno
|
Annotation analysis using a wide variety of genomic annotationsc
|
~30
|
Similarity analysis
|
xSocialiser
|
A template for similarity analysis
|
~60
|
xSocialiserGenes
|
Gene-based similarity analysis using structured ontologies on functions, diseases, and phenotypes
|
~70
|
xSocialiserSNPs
|
SNP-based similarity analysis using Experimental Factor Ontology on GWAS traits
|
~60
|
xCircos
|
Circos plot of similarity outputs
|
~10
|
xSocialiserDAGplot
|
DAG plot of one set of terms used for similarity analysis
|
<1
|
xSocialiserDAGplotAdv
|
DAG plot of two sets of terms used for similarity analysis
|
<1
|
Network analysis
|
xSubneterGenes
|
Gene-based network analysis
|
~60
|
xSubneterSNPs
|
SNP-based network analysis
|
~60
|
xVisNet
|
Network visualisation
|
<1
|