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Table 2 Comparison to other commonly used tools

From: XGR software for enhanced interpretation of genomic summary data, illustrated by application to immunological traits

  Enrichment analysis Annotation analysis Similarity analysis Network analysis Availability Prioritisation Communication
Support multiple ontologies Respect ontology structure Via gene annotation Via genomic annotations Between genes Between SNPs Gene-based SNP-based Package Web-app Gene-level prioritisation Mailing list/FAQ platform
XGR Yes Yes Yes Yes Yes Yes Yes Yes Yes Yes - -
DAVID Yes No - - - - - - No Yes - Yes
GREAT Yes No Yes No - - - - No Yes - Yes
DEPICT Yes No Yes Yes - - - - Yes No Yes Yes
GOSemSim - - - - Yes No - - Yes No - -
GRAIL - - - - - - No Yes No Yes Yes -
dnet Yes Yes - - - - Yes No Yes No - -
jActiveModule - - - - - - Yes No Yes No - Yes