From: DNA methylation changes at infertility genes in newborn twins conceived by in vitro fertilisation
Chromosome | Start | End | P | FDR adjusted P | P (adjusted for maternal age) | Gene namea | Gene starta | Gene enda |
---|---|---|---|---|---|---|---|---|
Chr2 | 217726751 | 217727250 | 2.30E-09 | 0.0221 | 6.40E-10 | AC007557.1 | 217735495 | 217736362 |
TNP1 | 217724181 | 217724787 | ||||||
Chr5 | 178761751 | 178762250 | 5.43E-08 | 0.1244 | 1.76E-05 | ADAMTS2 | 178537852 | 178772431 |
Chr9 | 97504001 | 97504500 | 5.83E-08 | 0.1244 | 5.14E-07 | C9orf3 | 97488983 | 97849441 |
Chr5 | 9275751 | 9276250 | 5.86E-08 | 0.1244 | 1.67E-06 | SEMA5A | 9035138 | 9546187 |
Chr4 | 184814001 | 184814500 | 7.95E-08 | 0.1244 | 4.96E-07 | STOX2 | 184774584 | 184944679 |
Chr5 | 142488501 | 142489000 | 8.73E-08 | 0.1244 | 5.76E-07 | ARHGAP26 | 142149949 | 142608576 |
Chr9 | 118148751 | 118149250 | 9.20E-08 | 0.1244 | 4.61E-06 | DEC1 | 117904097 | 118164923 |
Chr9 | 118149001 | 118149500 | 1.04E-07 | 0.1244 | 3.47E-06 | DEC1 | 117904097 | 118164923 |
Chr11 | 82654251 | 82654750 | 1.30E-07 | 0.1250 | 5.26E-08 | C11orf82 | 82611017 | 82669319 |
PRCP | 82534544 | 82681626 | ||||||
RAB30 | 82684175 | 82782965 | ||||||
Chr19 | 6165251 | 6165750 | 1.40E-07 | 0.1250 | 1.00E-06 | RFX2 | 5993175 | 6199583 |
ACSBG2 | 6135258 | 6193112 | ||||||
MLLT1 | 6212966 | 6279959 | ||||||
Chr1 | 85522251 | 85522750 | 1.43E-07 | 0.1250 | 2.56E-07 | WDR63 | 85464830 | 85598821 |
MCOLN3 | 85483765 | 85514182 | ||||||
Chr17 | 42569001 | 42569500 | 1.64E-07 | 0.1274 | 1.90E-05 | GPATCH8 | 42472652 | 42580798 |
Chr4 | 141606501 | 141607000 | 2.03E-07 | 0.1274 | 1.59E-05 | TBC1D9 | 141541919 | 141677274 |
Chr5 | 137736001 | 137736500 | 2.06E-07 | 0.1274 | 1.13E-06 | REEP2 | 137774706 | 137782658 |
KDM3B | 137688285 | 137772717 | ||||||
Chr5 | 150614501 | 150615000 | 2.14E-07 | 0.1274 | 2.23E-07 | SLC36A3 | 150656323 | 150683327 |
GM2A | 150591711 | 150650001 | ||||||
CCDC69 | 150560613 | 150603706 | ||||||
Chr17 | 36918251 | 36918750 | 2.32E-07 | 0.1274 | 2.02E-07 | MLLT6 | 36861795 | 36886056 |
CISD3 | 36886488 | 36891297 | ||||||
CWC25 | 36956687 | 36981734 | ||||||
PIP4K2B | 36921942 | 36956379 | ||||||
PCGF2 | 36890150 | 36906070 | ||||||
CTB-58E17.5 | 36905613 | 36906969 | ||||||
PSMB3 | 36908989 | 36920484 | ||||||
AC006449.1 | 36884086 | 36884451 | ||||||
Chr6 | 126138251 | 126138750 | 2.36E-07 | 0.1274 | 2.12E-06 | NCOA7 | 126102307 | 126252266 |
Chr7 | 144431251 | 144431750 | 2.70E-07 | 0.1274 | 5.29E-09 | TPK1 | 144149034 | 144533488 |
Chr12 | 70937251 | 70937750 | 2.76E-07 | 0.1274 | 1.83E-06 | PTPRB | 70910630 | 71031220 |
Chr4 | 141606251 | 141606750 | 2.80E-07 | 0.1274 | 1.50E-05 | TBC1D9 | 141541919 | 141677274 |
Chr13 | 90019001 | 90019500 | 2.84E-07 | 0.1274 | 5.94E-07 | - | - | - |
Chr11 | 74179001 | 74179500 | 2.92E-07 | 0.1274 | 1.61E-09 | LIPT2 | 74202757 | 74204778 |
POLD3 | 74204896 | 74380162 | ||||||
KCNE3 | 74165886 | 74178774 | ||||||
Chr12 | 99153001 | 99153500 | 3.93E-07 | 0.1637 | 2.44E-07 | ANKS1B | 99120235 | 100378432 |
APAF1 | 99038919 | 99129204 | ||||||
Chr2 | 223336751 | 223337250 | 4.47E-07 | 0.1788 | 2.00E-06 | SGPP2 | 223289236 | 223425667 |
Chr8 | 120972001 | 120972500 | 4.98E-07 | 0.1869 | 3.26E-08 | DEPTOR | 120885957 | 121063152 |
Chr17 | 38047001 | 38047500 | 5.25E-07 | 0.1869 | 7.83E-06 | GSDMB | 38060848 | 38076107 |
ZPBP2 | 38024417 | 38034149 | ||||||
IKZF3 | 37921198 | 38020441 | ||||||
ORMDL3 | 38077294 | 38083854 | ||||||
Chr4 | 64626751 | 64627250 | 5.45E-07 | 0.1869 | 2.67E-06 | - | - | - |
Chr16 | 87256751 | 87257250 | 5.51E-07 | 0.1869 | 2.12E-08 | C16orf95 | 87117168 | 87351022 |
Chr19 | 10656751 | 10657250 | 5.77E-07 | 0.1869 | 1.42E-06 | CDKN2D | 10677138 | 10679735 |
ATG4D | 10654571 | 10664094 | ||||||
KEAP1 | 10596796 | 10614417 | ||||||
AP1M2 | 10683347 | 10697991 | ||||||
KRI1 | 10663761 | 10676713 | ||||||
S1PR5 | 10623623 | 10628607 | ||||||
Chr7 | 2487251 | 2487750 | 5.85E-07 | 0.1869 | 2.03E-05 | CHST12 | 2443223 | 2474242 |
Chr11 | 74178751 | 74179250 | 6.82E-07 | 0.2059 | 1.31E-07 | KCNE3 | 74165886 | 74178774 |
LIPT2 | 74202757 | 74204778 | ||||||
POLD3 | 74204896 | 74380162 | ||||||
Chr10 | 119176501 | 119177000 | 6.87E-07 | 0.2059 | 1.11E-06 | PDZD8 | 119040000 | 119134978 |
Chr22 | 34755251 | 34755750 | 7.32E-07 | 0.2094 | 1.76E-05 | - | - | - |
Chr6 | 161664751 | 161665250 | 7.42E-07 | 0.2094 | 2.93E-06 | AGPAT4 | 161551011 | 161695093 |
Chr16 | 17161751 | 17162250 | 7.80E-07 | 0.2137 | 2.41E-06 | XYLT1 | 17195626 | 17564738 |
Chr18 | 23695001 | 23695500 | 8.39E-07 | 0.2235 | 1.97E-06 | PSMA8 | 23713816 | 23773319 |
SS18 | 23596578 | 23671181 | ||||||
Chr9 | 26364751 | 26365250 | 8.90E-07 | 0.2267 | 1.02E-06 | - | - | - |
Chr1 | 25227001 | 25227500 | 9.05E-07 | 0.2267 | 1.61E-05 | RUNX3 | 25226002 | 25291612 |
Chr13 | 68877251 | 68877750 | 9.43E-07 | 0.2267 | 2.19E-05 | - | - | - |
Chr9 | 89126501 | 89127000 | 9.59E-07 | 0.2267 | 7.00E-06 | - | - | - |
Chr13 | 35317501 | 35318000 | 9.72E-07 | 0.2267 | 2.51E-05 | - | - | - |
Chr21 | 19575001 | 19575500 | 9.92E-07 | 0.2267 | 2.31E-06 | CHODL | 19273580 | 19639690 |
Chr2 | 169470001 | 169470500 | 1.06E-06 | 0.2307 | 4.35E-07 | CERS6 | 169312372 | 169631644 |
Chr12 | 4310251 | 4310750 | 1.06E-06 | 0.2307 | 8.13E-05 | - | - | - |
Chr6 | 157136501 | 157137000 | 1.15E-06 | 0.2448 | 1.61E-06 | ARID1B | 157099063 | 157531913 |
Chr14 | 104067251 | 104067750 | 1.17E-06 | 0.2448 | 8.21E-06 | APOPT1 | 104029299 | 104073860 |
BAG5 | 104022881 | 104029168 | ||||||
KLC1 | 104028233 | 104167888 | ||||||
RP11-73Â M18.2 | 104029299 | 104152261 |