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Table 2 FDR 25% WBC IVF-DMRs

From: DNA methylation changes at infertility genes in newborn twins conceived by in vitro fertilisation

Chromosome

Start

End

P

FDR adjusted P

P (adjusted for maternal age)

Gene namea

Gene starta

Gene enda

Chr2

217726751

217727250

2.30E-09

0.0221

6.40E-10

AC007557.1

217735495

217736362

TNP1

217724181

217724787

Chr5

178761751

178762250

5.43E-08

0.1244

1.76E-05

ADAMTS2

178537852

178772431

Chr9

97504001

97504500

5.83E-08

0.1244

5.14E-07

C9orf3

97488983

97849441

Chr5

9275751

9276250

5.86E-08

0.1244

1.67E-06

SEMA5A

9035138

9546187

Chr4

184814001

184814500

7.95E-08

0.1244

4.96E-07

STOX2

184774584

184944679

Chr5

142488501

142489000

8.73E-08

0.1244

5.76E-07

ARHGAP26

142149949

142608576

Chr9

118148751

118149250

9.20E-08

0.1244

4.61E-06

DEC1

117904097

118164923

Chr9

118149001

118149500

1.04E-07

0.1244

3.47E-06

DEC1

117904097

118164923

Chr11

82654251

82654750

1.30E-07

0.1250

5.26E-08

C11orf82

82611017

82669319

PRCP

82534544

82681626

RAB30

82684175

82782965

Chr19

6165251

6165750

1.40E-07

0.1250

1.00E-06

RFX2

5993175

6199583

ACSBG2

6135258

6193112

MLLT1

6212966

6279959

Chr1

85522251

85522750

1.43E-07

0.1250

2.56E-07

WDR63

85464830

85598821

MCOLN3

85483765

85514182

Chr17

42569001

42569500

1.64E-07

0.1274

1.90E-05

GPATCH8

42472652

42580798

Chr4

141606501

141607000

2.03E-07

0.1274

1.59E-05

TBC1D9

141541919

141677274

Chr5

137736001

137736500

2.06E-07

0.1274

1.13E-06

REEP2

137774706

137782658

KDM3B

137688285

137772717

Chr5

150614501

150615000

2.14E-07

0.1274

2.23E-07

SLC36A3

150656323

150683327

GM2A

150591711

150650001

CCDC69

150560613

150603706

Chr17

36918251

36918750

2.32E-07

0.1274

2.02E-07

MLLT6

36861795

36886056

CISD3

36886488

36891297

CWC25

36956687

36981734

PIP4K2B

36921942

36956379

PCGF2

36890150

36906070

CTB-58E17.5

36905613

36906969

PSMB3

36908989

36920484

AC006449.1

36884086

36884451

Chr6

126138251

126138750

2.36E-07

0.1274

2.12E-06

NCOA7

126102307

126252266

Chr7

144431251

144431750

2.70E-07

0.1274

5.29E-09

TPK1

144149034

144533488

Chr12

70937251

70937750

2.76E-07

0.1274

1.83E-06

PTPRB

70910630

71031220

Chr4

141606251

141606750

2.80E-07

0.1274

1.50E-05

TBC1D9

141541919

141677274

Chr13

90019001

90019500

2.84E-07

0.1274

5.94E-07

-

-

-

Chr11

74179001

74179500

2.92E-07

0.1274

1.61E-09

LIPT2

74202757

74204778

POLD3

74204896

74380162

KCNE3

74165886

74178774

Chr12

99153001

99153500

3.93E-07

0.1637

2.44E-07

ANKS1B

99120235

100378432

APAF1

99038919

99129204

Chr2

223336751

223337250

4.47E-07

0.1788

2.00E-06

SGPP2

223289236

223425667

Chr8

120972001

120972500

4.98E-07

0.1869

3.26E-08

DEPTOR

120885957

121063152

Chr17

38047001

38047500

5.25E-07

0.1869

7.83E-06

GSDMB

38060848

38076107

ZPBP2

38024417

38034149

IKZF3

37921198

38020441

ORMDL3

38077294

38083854

Chr4

64626751

64627250

5.45E-07

0.1869

2.67E-06

-

-

-

Chr16

87256751

87257250

5.51E-07

0.1869

2.12E-08

C16orf95

87117168

87351022

Chr19

10656751

10657250

5.77E-07

0.1869

1.42E-06

CDKN2D

10677138

10679735

ATG4D

10654571

10664094

KEAP1

10596796

10614417

AP1M2

10683347

10697991

KRI1

10663761

10676713

S1PR5

10623623

10628607

Chr7

2487251

2487750

5.85E-07

0.1869

2.03E-05

CHST12

2443223

2474242

Chr11

74178751

74179250

6.82E-07

0.2059

1.31E-07

KCNE3

74165886

74178774

LIPT2

74202757

74204778

POLD3

74204896

74380162

Chr10

119176501

119177000

6.87E-07

0.2059

1.11E-06

PDZD8

119040000

119134978

Chr22

34755251

34755750

7.32E-07

0.2094

1.76E-05

-

-

-

Chr6

161664751

161665250

7.42E-07

0.2094

2.93E-06

AGPAT4

161551011

161695093

Chr16

17161751

17162250

7.80E-07

0.2137

2.41E-06

XYLT1

17195626

17564738

Chr18

23695001

23695500

8.39E-07

0.2235

1.97E-06

PSMA8

23713816

23773319

SS18

23596578

23671181

Chr9

26364751

26365250

8.90E-07

0.2267

1.02E-06

-

-

-

Chr1

25227001

25227500

9.05E-07

0.2267

1.61E-05

RUNX3

25226002

25291612

Chr13

68877251

68877750

9.43E-07

0.2267

2.19E-05

-

-

-

Chr9

89126501

89127000

9.59E-07

0.2267

7.00E-06

-

-

-

Chr13

35317501

35318000

9.72E-07

0.2267

2.51E-05

-

-

-

Chr21

19575001

19575500

9.92E-07

0.2267

2.31E-06

CHODL

19273580

19639690

Chr2

169470001

169470500

1.06E-06

0.2307

4.35E-07

CERS6

169312372

169631644

Chr12

4310251

4310750

1.06E-06

0.2307

8.13E-05

-

-

-

Chr6

157136501

157137000

1.15E-06

0.2448

1.61E-06

ARID1B

157099063

157531913

Chr14

104067251

104067750

1.17E-06

0.2448

8.21E-06

APOPT1

104029299

104073860

BAG5

104022881

104029168

KLC1

104028233

104167888

RP11-73 M18.2

104029299

104152261

  1. aFrom GENCODE v19