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Table 2 Additional viral infection cohorts

From: KLRD1-expressing natural killer cells predict influenza susceptibility

Cohort

Virus

Tissue

Controls

Acute infection

Platform

Citations

GSE11348

HRV

Nasal scrapings

15

15

Affymetrix

[22]

GSE97742 HRV

HRV

Nasopharyngeal swabs

30

30

Illumina

[23]

GSE97742 RSV

RSV

Nasopharyngeal swabs

38

38

Illumina

[23]

GSE97742 RSVco

RSV co-infected with other viruses

Nasopharyngeal swabs

15

15

Illumina

[23]

GSE61821 mild H1N1

Seasonal H1N1

Whole blood

36

32

Illumina

[40]

GSE61821 mild H3N2

Seasonal H3N2

Whole blood

13

15

Illumina

[40]

GSE61821 severe H1N1

Seasonal H1N1

Whole blood

19

16

Illumina

[40]

GSE61821 severe H3N2

Seasonal H3N2

Whole blood

6

7

Illumina

[40]

GSE61821 pandemic H1N1

Pandemic H1N1

Whole blood

8

10

Illumina

[40]

GSE68310 flu

Influenza A

Whole blood

40

34

Illumina

[24]

GSE43777

Dengue

PBMC

45

45

Affymetrix

[41]

GSE51808

Dengue

Whole blood

9

13

Affymetrix

[42]

GSE68310 HRV

HRV

Whole blood

20

20

Illumina

[24]

GSE97741 HRV

HRV

Whole blood

25

24

Illumina

[23]

GSE67059 RSV

RSV

Whole blood

20

65

Illumina

[43]

GSE97741 RSV

RSV

Whole blood

25

28

Illumina

[23]

Total

8

4

364

407

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