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Table 3 Top 20 differentially variable positions between RA-affected and non-RA twins. Probe names are shown, along with t-statistic p value, Bartlett’s test for differential variability, which group was hypervariable, and probe annotation

From: Increased DNA methylation variability in rheumatoid arthritis-discordant monozygotic twins

Probe

P(tt)

P(BT)

Hypervariable group

Chr

Relationship to gene

Gene symbol

cg11374732

0.000513329

4.09E−06

RA

2

Body

INPP5D

cg01999539

0.000614047

1.50E−05

RA

6

  

cg23280983

0.000689806

2.11E−05

RA

2

TSS200

C2orf42

cg20500144

0.000950244

6.82E−05

RA

3

Body

ARL6IP5

cg26985354

0.001008386

2.18E−08

RA

19

Body

SFRS16

cg26827503

0.001032395

2.68E−05

RA

4

Body

TMEM156

cg11913894

0.001053694

2.93E−06

RA

6

TSS1500

MAP3K4

cg16583193

0.001125272

4.49E−06

RA

19

Body

PIP5K1C

cg15573998

0.001139278

3.52E−05

RA

2

Body

NRXN1

cg16012388

0.001186516

5.35E−06

RA

10

Body

BICC1

cg16397722

0.00119032

9.50E−06

RA

17

Body

TP53

cg20556304

0.001192582

3.94E−11

RA

6

  

cg25173129

0.00134302

2.51E−07

Healthy

17

TSS1500

EPX

cg01928104

0.001384944

3.10E−06

RA

14

TSS1500

SNORD114-7

cg06734169

0.001534366

4.20E−07

RA

3

5′UTR

LRRFIP2

cg04845047

0.00156418

4.88E−05

RA

13

  

cg26788916

0.001792861

7.32E−05

RA

20

  

cg00340024

0.001861004

3.01E−05

RA

1

  

cg08306614

0.001980509

1.42E−05

RA

7

3′UTR

NUDCD3

cg19929189

0.001981039

3.59E−09

RA

6

  
  1. P(tt) t-statistic p value, P(BT) Bartlett’s test p value, Chr chromosome