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Table 1 DawnRank analysis of entinostat-treated MMTV/Neu samples

From: Identification of Jun loss promotes resistance to histone deacetylase inhibitor entinostat through Myc signaling in luminal breast cancer

Untreated (N = 6)

Entinostat-3wks (N = 4)

Entinostat-6wks (N = 4)

Entinostat-resistant (N = 8)

Gene

Percent rank

Chr

Gene

Percent rank

Chr

Gene

Percent rank

Chr

Gene

Percent rank

Chr

MAX

1

12

JUN

0.977

4

JUN

0.997

4

JUN

0.999

4

CALM1

0.995

12

CDC42

0.975

4

CDC42

0.994

4

JAK1

0.995

4

HIF1A

0.990

12

JAK1

0.969

4

JAK1

0.992

4

CDC42

0.990

4

ACTN1

0.986

12

LCK

0.969

4

LCK

0.989

4

CDKN2A

0.989

4

FOS

0.981

12

LYN

0.965

4

LYN

0.987

4

LCK

0.987

4

HSP90AA1

0.976

12

MAP3K7

0.960

4

MAP3K7

0.984

4

TGFBR1

0.984

4

FOXA1

0.972

12

ERBB2

0.959

11

CDKN2A

0.982

4

LRP8

0.983

4

ARF6

0.967

12

CDKN2A

0.952

4

ZBTB17

0.979

4

ZBTB17

0.981

4

FBLN5

0.963

12

TGFBR1

0.950

4

TGFBR1

0.977

4

TLE1

0.980

4

NCOA1

0.958

12

RBBP4

0.948

4

RBBP4

0.974

4

LYN

0.980

4

NFKBIA

0.953

12

ZBTB17

0.944

4

LRP8

0.972

4

RBBP4

0.979

4

  1. Chr, mouse chromosome; Entinostat-3wks, Entinostat-6wks, Entinostat-resistant are samples treated with entinostat for 3 weeks, 6 weeks, and until progression, respectively