Table 4 Novel virulence plasmids sequenced in this study and their host isolate properties
Isolate | Virulence plasmid (accession) | iuc lineage | AMR genes | AMR genes elsewhere in genome |
|---|---|---|---|---|
Sample data and chromosomal typing | ||||
Size and rep type(s) | ||||
2579 Nepal, 2016 ST15, KL112, ICEKp12 | p2579_1 (MK649822) 182,805 bp IncHI1B | iuc1 | – | qnrB1, strA^B, mphA, arr2, sulII^, dfrA14, blaOXA-232, blaCTX-M-15, blaTEM-30^ |
BA6740 India, 2016 ST11, KL24, ICEKp12 | pBA6740_1 (MK649823) 226,590 bp IncFIB(pQIL), IncFIIK | Iuc1 | qnrB1 | strA^B, rmtF, mphA, arr2, sulII, blaOXA-232, blaCTX-M-15, blaSHV-11, blaTEM-30^ |
BA813 India, 2017 ST2096, KL64, ICEKp5 | pBA813_1 (MK649825) 273,676 bp IncFIB(Mar), IncFIB | iuc1 | blaCTX-M-15, blaOXA-232, blaTEM-54^, aadA2^, armA, msrE, mphE^, catA1^, sulI, tetD, dfrA12, dfrA14 | Sat-2A, sulI, dfrA1, blaOXA-1 |
BA6201 India, 2017 ST231, KL51, ICEKp5 | pBA6201_1 (MK649824) 195,016 bp IncFIA, IncFIB(pQIL), IncFIIK, IncFII | iuc 1 | rmtF, mphA, ermB^, catA1^, arr2 | blaCTX-M-15, blaTEM-30^ |
16114547 Laos, 2016 ST290, KL21 | p16114547_1 (MK649829) 187,989 bp IncFIBK, IncFII | iuc 3 | qnrS1, tetA^, blaTEM-30^ | blaSHV-26^ |
1675474 Laos, 2015 ST7-1LV, KL54 | p1675474_1 (MK649827) 181,647 bp IncFIBK, IncFII | iuc 3 | catA2^, sulII | qnrS1, tetA^, blaTEM-30^ |
1675479 Laos, 2015 ST945-2LV, KL125 | p1675479_1 (MK649828) 167,992 bp IncFIBK, IncFII | iuc 3 | strA^B, sulII | tetA |
130411–38618 Vietnam, 2011 ST17, KL127 | p130411-38,618_1 (MK649826) 241,799 bp IncFIBK, IncFIIK | iuc3 | strA^B, aadA1, cmlA5, floR, arr2^, sulII, tetA, dfrA14, blaOXA-10 |