Table 1 M. tuberculosis phylogenetic lineages identified in the isolates analysed
Lineage (sublineage) | Non-MDR/DS (n = 287) | MDR1 (n = 125) | Overall (n = 412) | |||
|---|---|---|---|---|---|---|
No. | % | No. | % | No. | % | |
Beijing | 82 | 28.6 | 6 | 4.8 | 88 | 21.4 |
Delhi/CAS | 3 | 1.1 | 0 | 0.0 | 3 | 0.7 |
East African/Indian | 18 | 6.3 | 15 | 12.0 | 33 | 8.0 |
Euro-American (Haarlem) | 13 | 4.5 | 6 | 4.8 | 19 | 4.6 |
Euro-American (LAM [Latin-American/Mediterranean]) | 72 | 25.1 | 5 | 4.0 | 77 | 18.7 |
Euro-American (S-type) | 10 | 3.5 | 46 | 36.8 | 56 | 13.6 |
Euro-American (Swaziland 1) | 11 | 3.8 | 0 | 0.0 | 11 | 2.7 |
Euro-American (Swaziland H37Rv like) | 18 | 6.3 | 91 | 7.2 | 27 | 6.6 |
Euro-American (URAL) | 1 | 0.4 | 0 | 0.0 | 1 | 0.2 |
Euro-American (X-type) | 43 | 15.0 | 38 | 30.4 | 81 | 19.7 |
Euro-American superlineage | 16 | 5.6 | 0 | 0.0 | 16 | 3.9 |