Table 3 Ad hoc scheme used to name the Tn1546 variants present in the predicted vanA plasmid sequences
From: Mode and dynamics of vanA-type vancomycin resistance dissemination in Dutch hospitals
Type | Position | Nomenclature |
|---|---|---|
SNP | C806T | 1 |
SNP | G3966T | 2 |
SNP | G4351T | 3 |
SNP | T7658C | 4 |
SNP | G7747T | 5 |
SNP | G8234T | 6 |
SNP | C8833T | 7 |
SNP | C9692T | 8 |
Deletion | orf1 | M |
Deletion | orf2 | N |
Deletion | vanR | R |
Deletion | vanS | S |
Deletion | vanH | H |
Deletion | vanA | A |
Deletion | vanX | X |
Deletion | vanY | Y |
Deletion | vanZ | Z |
Deletion | Intergenic | I |