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Fig. 3 | Genome Medicine

Fig. 3

From: A reference profile-free deconvolution method to infer cancer cell-intrinsic subtypes and tumor-type-specific stromal profiles

Fig. 3

a Association between overall survival and stromal cell fraction estimated by different methods. Kaplan-Meier curves of patients with high/low stromal compartment fractions as defined by DeClust in the KIRC (b) and BLCA (c) TCGA datasets. Heat maps of the gene expression levels estimated by DeClust of cell type-specific markers (d) and EMT genes (e) in the stromal compartment across the 13 cancer types

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Genome Medicine

ISSN: 1756-994X

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