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Table 3 Summary of OncoGEMINI unique filtering of breast metastatic samples

From: OncoGEMINI: software for investigating tumor variants from multiple biopsies with integrated cancer annotations

Patient Expected metastatic mutations OncoGEMINI unique
Tool only With filtersa
ER1 3 100 2
CTPS2 (D153E) CTPS2 (D153E) FGFR4 (N495K)
FGFR4 (N495K) FGFR4 (N495K) MGA (splice)
MGA (splice) MGA (splice)  
ER2 1 181 6
SPEN (E2151K) SPEN (E2151K) SPEN (E2151K)
ER3 0 4 0
TN1 0 17 0
  1. aRequires impact_severity ! = ‘LOW’ and the cgi_gene ! = “