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Table 2 Frequencies of carriers of candidate FANCI variants identified in Australian HGSC cases and controls

From: A functionally impaired missense variant identified in French Canadian families implicates FANCI as a candidate ovarian cancer-predisposing gene

    

Number of variant carriers3 (%)

 

Study group1

Number of subjects (%)

c.13A>G p.I5V

c.286G>A p.E96K

c.824 T>C p.I275T

c.1264G>A p.G422R

c.1412C>G p.P471R

c.1573A>G p.M525V

c.1813C>T p.L605F4

c.2366C>T p.A789V4

c.3635T>C p.F1212S

c.3812C>T p.S1271F

Total number of carriers4 (%)

HGSC

516 (100)

1 (0.2)

1 (0.2)

1 (0.2)

2 (0.4)

1 (0.2)

3 (0.6)

10 (1.9)

1 (0.2)

1 (0.2)

1 (0.2)

21 (4.1)

Controls

4878 (100)

0

5 (0.1)

5 (0.1)

7 (0.1)

0

43 (0.88)

95 (1.9)

0

0

1 (0.02)

156 (3.2)

Family history of HGSC cases2

            

≥ 2 OC cases (no BC)

7 (1)

0

0

0

0

0

1 [14]

0

0

0

0

1 (14)

1 OC case (no BC)

49 (10)

0

0

0

0

0

0

0

0

0

0

0

≥ 2 OC case and BC cases

42 (8)

0

0

0

1 (2.4)

1 (2.4)

0

5 [12]

1 (2.4)

0

0

7 (17)

Total with OC family history

98 (19)

0

0

0

1 (1)

1 (1)

1 (1)

5 (5.1)

1 (1)

0

0

8 (8.2)

≥ 2 BC cases (no OC)

45 (9)

0

0

0

0

0

1 (2.2)

0

0

0

0

1 (2.2)

1 BC case (no OC)

125 (24)

0

1 (0.8)

1 (0.8)

0

0

0

1 (0.8)

0

0

0

3 (2.4)

No OC or BC

248 (48)

1 (0.4)

0

0

1 (0.4)

0

1 (0.4)

4 (1.6)

0

1 (0.4)

1 (0.4)

9 (3.6)

Total isolated HGSC

418 (81)

1 (0.2)

1 (0.2)

1 (0.2)

1 (0.2)

0

2 (0.5)

5 (1.2)

 

1 (0.2)

1 (0.2)

13 (3.1)

  1. 1See Additional file 1: Table S1 for description of study groups; 95% of the participants were of Western European ancestry
  2. 2First-, second-, or third-degree relatives reported for OC; first- and second-degree relatives only reported for BC
  3. 3See Additional file 1: Table S9 for more information on FANCI variants found in these study groups
  4. 4One HGSC case carried two FANCI variants: c.1813C>T; p.L605F and c.2366C>T; p.A789V (see Additional file 1: Table S9)