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Fig. 6 | Genome Medicine

Fig. 6

From: Microbiota of the prostate tumor environment investigated by whole-transcriptome profiling

Fig. 6

A Volcano plot showing differentially expressed host genes in the comparison between high vs. low Shewanella counts group. Genes involved in significant KEGG pathways (Table 5) are also labelled in the plot. Benjamini-Hochberg corrected p values are reported. NS not significant. FC fold change. B Bar chart showing association between cell types and Shewanella. A Wilcoxon test was used to determine significant associations. Horizontal line corresponds to a p value cut-off of 0.05. FDR corrected p values are reported. Dendritic cells (DC) showed a significant association with Shewanella. C Boxplot showing differences in the enrichment score for DC between high vs. low Shewanella counts group

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