Table 2 Most abundant microbial species in the prostate tissue of patients who had PCa
From: Microbiota of the prostate tumor environment investigated by whole-transcriptome profiling
Species | Total reads across all samples (n = 106) | Relative proportions (% of all reads) | Mean number of reads per sample | Standard deviation |
|---|---|---|---|---|
Enterobacter hormaechei* | 674,201 | 23.9 | 6360.3 | 2749.8 |
Streptococcus pneumoniae* | 195,368 | 6.9 | 1843.1 | 1185.9 |
Acinetobacter baumannii* | 181,489 | 6.4 | 1712.1 | 2856.3 |
Mycobacterium sp.* | 164,496 | 5.8 | 1551.8 | 1174.1 |
Salmonella enterica | 153,667 | 5.4 | 1449.6 | 1078.6 |
Escherichia coli* | 104,243 | 3.7 | 983.42 | 913.3 |
Campylobacter jejuni | 102,543 | 3.6 | 967.3 | 515.7 |
Clostridioides difficile | 102,525 | 3.6 | 1235.2 | 4082.6 |
Mycobacterium abscessus* | 98,079 | 3.4 | 925.2 | 476.9 |
Bacillus cereus* | 33,484 | 1.1 | 1455.8 | 883.4 |
Other | 1,002,742 | 35.6 | 9459.8 | 5067.9 |