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Table 2 Most abundant microbial species in the prostate tissue of patients who had PCa

From: Microbiota of the prostate tumor environment investigated by whole-transcriptome profiling

Species Total reads across all samples (n = 106) Relative proportions (% of all reads) Mean number of reads per sample Standard deviation
Enterobacter hormaechei* 674,201 23.9 6360.3 2749.8
Streptococcus pneumoniae* 195,368 6.9 1843.1 1185.9
Acinetobacter baumannii* 181,489 6.4 1712.1 2856.3
Mycobacterium sp.* 164,496 5.8 1551.8 1174.1
Salmonella enterica 153,667 5.4 1449.6 1078.6
Escherichia coli* 104,243 3.7 983.42 913.3
Campylobacter jejuni 102,543 3.6 967.3 515.7
Clostridioides difficile 102,525 3.6 1235.2 4082.6
Mycobacterium abscessus* 98,079 3.4 925.2 476.9
Bacillus cereus* 33,484 1.1 1455.8 883.4
Other 1,002,742 35.6 9459.8 5067.9
  1. *Genera of these species are known to be common contaminants in sequencing based microbiome studies