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Fig. 3 | Genome Medicine

Fig. 3

From: High fluoroquinolone resistance proportions among multidrug-resistant tuberculosis driven by dominant L2 Mycobacterium tuberculosis clones in the Mumbai Metropolitan Region

Fig. 3

Maximum likelihood phylogeny based on the concatenated SNP sequence of 258 MTBC strains from allele-based cluster 1. The concatenated SNP sequence consists of 356 parsimony-informative, 961 singleton sites, and 1106 constant sites; mutations related to respective drugs and resistance status are color coded and expressed as annotation rings on the tree. SNP-based clusters with maximum distance of 12 (d12) is plotted on the outer ring. Abbreviations: INH, isoniazid; EMB, ethambutol; PZA, pyrazinamide; FQ, fluoroquinolones

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Genome Medicine

ISSN: 1756-994X

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