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Fig. 1 | Genome Medicine

Fig. 1

From: REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats

Fig. 1

An example plot generated by REViewer: A, B local haplotype sequences with read alignments; C estimated STR allele length; D a read that fully spans the STR sequence; E a flanking read that partially overlaps the STR; this read is depicted in a fainter color because it can be assigned to either haplotype; F a deletion in the read alignment; G a single-base mismatch; and H an insertion site

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