Fig. 2
From: Comprehensive de novo mutation discovery with HiFi long-read sequencing
Detailed overview of all small DNMs. Upset plot of small DNMs detected by SRS and LRS. The X-axis shows the concordance across different call sets. The Y-axis shows, from bottom to top, number of DNMs in each group, the DeepVariant Genotype Quality (GQ) scores of these small DNMs from the LRS data and the log-scaled GATK quality scores of these DNMs from the SRS data. Colors indicate the validation status and pie charts show the validation status of DNMs in each group