Microarray array | |||||||
---|---|---|---|---|---|---|---|
Samples | Type of DNA | Type of microarray | Call rate (%) | SNP calling (n) (105) | |||
Grandparentsa | g-DNA (saliva) | Human 610-Quad BeadChip | 99.70 ± 0.07 | 5.89 ± 0.004 | |||
WGS | |||||||
Samples | Type of DNA | Reads ( n ) (10 9 ) | Production (Gb) | Map rate (%) | Coverage (%) | Depth (fold) | Consistency in validation (%) |
Father | g-DNA (blood) | 0.72 | 71.89 | 89.75 | 99.71 | 21.86 | 99.23 |
Mother | g-DNA (blood) | 0.74 | 74.03 | 90.19 | 99.09 | 20.96 | 99.19 |
Offspring | g-DNA (cord blood) | 0.72 | 72.17 | 90.64 | 99.75 | 21.32 | 99.25 |
Plasma | Plasma DNA | 1.81 | 179.63 | 83.68 | 99.47 | 43.91 | - |