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Table 3 Significant GeneGo biological networks for proteins that met a FDR <0.05

From: Application of serum proteomics to the Women's Health Initiative conjugated equine estrogens trial reveals a multitude of effects relevant to clinical findings

Network number

Name

P-value

Network objects

Objects in the network*

1

Blood coagulation

1.66 e-6

7/83

UP: F12, F9, F10, PROZ, SERPING1, MST1

    

DOWN: MMP2

2

Complement system

1.57 e-4

5/73

UP: SERPING1, C2 (C2a, C2b)

    

DOWN: MBL2

3

Kallikrein-kinin system

2.84 e-4

7/183

UP: PLG, SERPING1, F9, F10, F12, HABP2

4

Cell adhesion, cell matrix interactions

6.34 e-4

7/209

UP: VTN, TGFBI, HABP2, LGALS3BP, LGALS1

    

DOWN: MMP2, COL1A1

5

Platelet-endothelium-

1.42 e-3

6/175

UP: PLG, F12, F10, SERPING1, VTN

 

leukocyte interactions

  

DOWN: MMP2

6

Ossification

4.34 e-3

5/152

UP: INHBE, IGFBP4, IGFBP1-IGFBP6

    

DOWN: IGF1, TLL1

7

Cell proliferation

5.4 e-3

5/160

UP: IGFBP1, IGFBP4, IGFBP6

    

DOWN: IGF1, MMP2

8

Protein C signaling

6.05 e-3

4/103

UP: PLG, F9, F10

    

DOWN: EDG3

  1. *UP and DOWN refer to up-regulated and down-regulated, respectively. C2, complement c2; LGALS3BP, galectin-3-binding protein; MBL2, mannose-binding protein C; NOTCH, neurogenic locus notch homolog protein 2; TGFBI, transforming growth factor-beta-induced protein ig-h3.