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Table 3 Rankings of experimentally validated regulatory variants from three real world analyses for SuRFR, GWAVA and CADD

From: SuRFing the genomics wave: an R package for prioritising SNPs by functionality

  Total number of variants SuRFR ranking of functional variant GWAVA ranking of functional variant CADD ranking of functional variant
SORT1 22 1st out of 22 6th out of 22 20th out of 22
EGR2 35 1st out of 35 2nd out of 35 18th out of 35
TCF7L2 6 2nd out of 6 2nd out of 6 2nd out of 6
  1. SuRFR performs consistently well against GWAVA and CADD on these three datasets.