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Figure 7 | Genome Medicine

Figure 7

From: SRST2: Rapid genomic surveillance for public health and hospital microbiology labs

Figure 7

SRST2 analysis of E. faecium hospital data and hospital outbreak investigation. Temporal distribution of isolates is shown in (a) coloured by vancomycin resistance as inferred from vanA-B detection with SRST2, and in (b) by coloured by sequence type inferred by SRST2. (c) Summary of all SRST2 results by sequence type (ST), in order from left to right: single linkage clustering of STs by number of shared alleles; MLST allele profiles; heatmap indicating the proportion of isolates that carries each resistance gene (scale as indicated), frequency of the ST (axis as indicated, coloured as in (b)).

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