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Table 3 HLA long haplotypes observed in our data and their population distribution records in a public database

From: HLAreporter: a tool for HLA typing from next generation sequencing data

Haplotype HLA A-B-C-DRB1-DQB1 Frequency (%) Population in DB a DB frequency (%)
A*33:03-B*58:01-C*03:02-DRB1*03:01-DQB1*02:01 3.36 USA Asian; V; SK; G 2.21; 3.50; 1.90; 0.25
A*02:07-B*46:01-C*01:02-DRB1*14:01-DQB1*05:02 1.34 USA Asianb 0.13
A*02:07-B*46:01-C*01:02-DRB1*04:05-DQB1*04:01 1.01 USA Asian 0.11
A*02:07-B*46:01-C*01:02-DRB1*09:01-DQB1*03:03 1.68 USA Asian 1.54; 2.00
A*11:01-B*13:01-C*03:04-DRB1*16:02-DQB1*05:02 0.67 USA Asian; Hispanic 0.18; 0.05
A*11:01-B*15:02-C*08:01-DRB1*15:01-DQB1*06:01 1.68 USA Asian 0.31
A*11:01-B*15:02-C*08:01-DRB1*12:02-DQB1*03:01 3.02 USA Asian; Yunnanc 1.41; 1.70-3.40
  1. aFull names of the populations in the database are USA Asian pop 2 (USA Asian), Vietnam Hanoi Kinh pop 2 (V), South Korea pop 3 (SK), Germany DKMS-Turkey minority (G), USA Hispanic pop 2 (Hispanic), China Yunan (Yunan). bThis population has a relatively large sample size of 1,772 in the database. cSeveral populations in this Yunnan group with small sample size are not shown.