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Fig. 3 | Genome Medicine

Fig. 3

From: Inferring pathway dysregulation in cancers from multiple types of omic data

Fig. 3

Correlation between GSOA output for microarray and RNA-Sequencing data. We used GSOA to compared HER2+ breast cancer samples against HER2 samples from TCGA for either microarrays or RNA-Sequencing data. GSOA output values correlated strongly for a) AUC scores and b) P values. Spearman correlation coefficients were used to quantify similarity in ranks between the values

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