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Table 1 SNPs with allele-specific expression in the LA

From: Allele-specific expression in the human heart and its application to postoperative atrial fibrillation and myocardial ischemia

SNP Gene Chr Location Samples Reads REF/ALT + REF FDR-adj. p value
rs3810232 RPS9 19 54,704,760 35 33,337 0.05 <10–300
rs111794229 TIMP3 22 33,257,378 23 9569 0.89 <10–300
rs202118461 LYRM5 12 25,357,576 32 3253 0.86 <10–300
rs112332443 TGOLN2 2 85,545,951 15 2395 0.95 2 × 10–293
rs422733 COL4A2 13 111,164,614 33 2714 0.92 2 × 10–291
rs3832425 SSR1 6 7,289,415 31 2281 0.92 5 × 10–267
rs1046138 PKP2 12 32,944,162 32 9156 0.84 1 × 10–253
rs3210020 PDLIM1 10 96,997,440 11 1746 0.89 4 × 10–233
rs1051336 HLA-DRA 6 32,412,592 19 10,132 0.74 8 × 10–232
rs9512 ABLIM3 5 148,639,762 30 2,580 0.22 8 × 10–204
  1. The table shows the ten SNPs with the most significant ASE in the LA samples (n = 5688), the gene they are located within, the genomic location, number of heterozygous samples and reads overlapping the SNP available for ASE calling, the REF/ALT + REF ratio, and the FDR-adjusted p value for ASE